MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,806
rRNA: 9
tRNA: 59
tmRNA: 1
Total number of protein coding genes annotated/found:
1,747
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5026|JADGKX010000002.1
MBF0770887.1
Genome Viewer
NA
AA
153/51
68086-67934
TetR family transcriptional regulator
SEQF5026|JADGKX010000010.1
MBF0771687.1
Genome Viewer
NA
AA
153/51
32402-32554
hypothetical protein
SEQF5026|JADGKX010000022.1
MBF0772281.1
Genome Viewer
NA
AA
153/51
23343-23495
lactacin F inducer peptide precursor
SEQF5026|JADGKX010000012.1
MBF0771808.1
Genome Viewer
NA
AA
156/52
7117-7272
matrixin family metalloprotease
SEQF5026|JADGKX010000009.1
MBF0771587.1
Genome Viewer
NA
AA
159/53
13767-13609
teichoic acid D-Ala incorporation-associated protein DltX
SEQF5026|JADGKX010000014.1
MBF0771927.1
Genome Viewer
NA
AA
162/54
21525-21686
CsbD family protein
SEQF5026|JADGKX010000010.1
MBF0771705.1
Genome Viewer
NA
AA
168/56
40147-40314
hypothetical protein
SEQF5026|JADGKX010000008.1
MBF0771553.1
Genome Viewer
NA
AA
171/57
69972-70142
hypothetical protein
SEQF5026|JADGKX010000017.1
MBF0772091.1
Genome Viewer
NA
AA
171/57
31393-31223
preprotein translocase subunit SecE
SEQF5026|JADGKX010000051.1
MBF0772355.1
Genome Viewer
NA
AA
171/57
1-172
hypothetical protein
SEQF5026|JADGKX010000086.1
MBF0772385.1
Genome Viewer
NA
AA
171/57
387-217
RidA family protein
SEQF5026|JADGKX010000016.1
MBF0772016.1
Genome Viewer
NA
AA
177/59
15291-15115
30S ribosomal protein S21
SEQF5026|JADGKX010000002.1
MBF0770895.1
Genome Viewer
NA
AA
180/60
76458-76637
4-oxalocrotonate tautomerase
SEQF5026|JADGKX010000006.1
MBF0771384.1
Genome Viewer
NA
AA
180/60
64381-64202
DUF3042 family protein
SEQF5026|JADGKX010000003.1
MBF0771006.1
Genome Viewer
NA
AA
183/61
24737-24555
hypothetical protein
SEQF5026|JADGKX010000006.1
MBF0771402.1
Genome Viewer
NA
AA
183/61
83676-83858
hypothetical protein
SEQF5026|JADGKX010000017.1
MBF0772079.1
Genome Viewer
NA
AA
183/61
23965-23783
hypothetical protein
SEQF5026|JADGKX010000002.1
MBF0770923.1
Genome Viewer
NA
AA
186/62
100590-100405
50S ribosomal protein L28
SEQF5026|JADGKX010000005.1
MBF0771255.1
Genome Viewer
NA
AA
186/62
48539-48354
50S ribosomal protein L30
SEQF5026|JADGKX010000005.1
MBF0771260.1
Genome Viewer
NA
AA
186/62
50641-50456
type Z 30S ribosomal protein S14
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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